Protein Alignment Abd-B and scro

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 437
• Identity: 91/437 - (20%)
• Similarity: 143/437 - (32%)
• Gaps: 139/437 - (31%)

  Fly   118 QQQQLQQQQQQQQQQLATTP----VAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVAS 178
            :::..::.|..:.|...|.|    :..:|||..|....:..|...:.:.......:..|.|:|::
  Fly    13 ERKSYRELQINRDQYFVTAPNEEDLVMSLSPKDTLIHTAISQHHQVDTSTKLNTNETSTQNTVST 77

  Fly   179 GASS----------------NLQQQQQ----QQNAAVAPGQTQIVAPTTASV----------SPS 213
            .|::                ||..|.|    ..|.:.....|.|::|...|.          ||.
  Fly    78 AAAAAVAHHHHNLSSIHHLQNLHSQHQSTLFNSNHSTPFSVTDILSPIEESYRKLELNGNPPSPF 142

  Fly   214 SVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYG-------SG 271
            ..:|....||               .||..| ||.....:.....|:..|...:.|       :|
  Fly   143 RSNSSSSSIN---------------SPGTLT-TSTMANPYAMGTLYHSPGVQTYCGPTDNLSLAG 191

  Fly   272 YYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSY 336
            :|                          .|...||:...:..|:....:|.....|..||
  Fly   192 HY--------------------------TDMRNSASWYGSTANDPRFAISRLMSSSASGT----- 225

  Fly   337 EPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLE 401
                              .|..|...||:..:|....|   |.....|  .||:|..:::.|..|
  Fly   226 ------------------MSHMGNMSGLAACSVSDSKP---LQFPLAQ--RRKRRVLFTQAQVYE 267

  Fly   402 LEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNNNNS------- 459
            ||:.|....|:|..:|..||..:.||..||||||||.|.|.|:.::.:|..:.|.:|.
  Fly   268 LERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQNQHNQPASSPRR 332

  Fly   460 ------------SSNHNHAQATQQH---------HSGHHLNLSLNMG 485
                        .|.:|.:..:|||         ::|...|.:.|.|
  Fly   333 VAVPVLVKDGKPCSGNNSSSQSQQHGTNSTSAGNNTGSANNGNANSG 379

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	25/55 (45%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	25/55 (45%)