Protein Alignment Abd-B and Gsc

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 500
• Identity: 110/500 - (22%)
• Similarity: 168/500 - (33%)
• Gaps: 171/500 - (34%)

  Fly    45 TTSHHHSAHPHLQQQQQQQQHAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQ 109
            ||:...|..|.:...:.:.:..||              |||:....||       |||...:..|
  Fly    15 TTTTTPSTTPDIPPSKAKFKITVV--------------STPSPSPPPT-------PPPAGSMLAQ 58

  Fly   110 QQHLPAPQQQQQLQQ------QQQQQQQQLATTP---VAGALSPAQTPTG----------PSAQQ 155
            .....:|.....|::      :|||..:|::.:|   .|..|:.|.....          .|..|
  Fly    59 MVETNSPPAGYTLKRSPSDLGEQQQPPRQISRSPGNTAAYHLTTAMLLNSQQCGYLGQRLQSVLQ 123

  Fly   156 QQHLTSPHHQQLPQQQTPNSVASGASSN---LQQQQ------------------QQQNAAVAPGQ 199
            |||   ..||| .|.|||:| ..|:.|.   |::::                  :||....||.|
  Fly   124 QQH---AQHQQ-SQSQTPSS-DDGSQSGVTILEEERRGGAAAASLFTIDSILGSRQQGGGTAPSQ 183

  Fly   200 TQIVAPT-----------------TASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTS 247
            ...::..                 :.:.||:|.:|.......:..:.|..:||:...||.
  Fly   184 GSHISSNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPIRPQRVPAMLQHPGL----- 243

  Fly   248 AAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAY 312
                 |..|.|       ....||:......|...|            ||:.|:...:||.|...
  Fly   244 -----HLGHLA-------AAAASGFAASPSDFLVAY------------PNFYPNYMHAAAVAHVA 284

  Fly   313 MNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPG 377
            ..:.:.|||.||                    .||.|:....:...|          .|..|:.|
  Fly   285 AAQMQAHVSGAA--------------------AGLSGHGHHPHHPHG----------HPHHPHLG 319

  Fly   378 LHEWTGQVSV------------RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQ 430
            .|. .||..:            |:.|..:::.|..:||..|....|.....|.:||..:.|.|.:
  Fly   320 AHH-HGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEER 383

  Fly   431 VKIWFQNRRMKNKKNSQRQANQQ--------------NNNNNSSS 461
            |::||:|||.|.:|  |::..|:              |...||||
  Fly   384 VEVWFKNRRAKWRK--QKREEQERLRKLQEEQCGSTTNGTTNSSS 426

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	19/55 (35%)
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	19/55 (35%)