DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and al

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_722629.1 Gene:al / 33208 FlyBaseID:FBgn0000061 Length:408 Species:Drosophila melanogaster


Alignment Length:155 Identity:47/155 - (30%)
Similarity:67/155 - (43%) Gaps:33/155 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   304 TSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGA 368
            :|||:|.|         :.....||.|                  |.||   .:||||||.: ..
  Fly    33 SSAASAGA---------ALTVSMSVSG------------------GAPS---GASGASGGTN-SP 66

  Fly   369 VGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKI 433
            |.....:....|:..:...|:.|..::.||..||||.|....|.....|.|||..:.|||.::::
  Fly    67 VSDGNSDCEADEYAPKRKQRRYRTTFTSFQLEELEKAFSRTHYPDVFTREELAMKIGLTEARIQV 131

  Fly   434 WFQNRRMKNKKNSQRQANQQNNNNN 458
            ||||||.|.:|  |.:...|::..|
  Fly   132 WFQNRRAKWRK--QEKVGPQSHPYN 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 24/55 (44%)
alNP_722629.1 Homeodomain 86..142 CDD:459649 24/55 (44%)
OAR 374..391 CDD:461067
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.