DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and HOXD12

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_067016.3 Gene:HOXD12 / 3238 HGNCID:5135 Length:270 Species:Homo sapiens


Alignment Length:292 Identity:83/292 - (28%)
Similarity:121/292 - (41%) Gaps:71/292 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 GASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFE 243
            |:..|||.......:.:.|...|:.|                       |.|:..|. .|.|...
Human    13 GSLLNLQSPDSFYFSNLRPNGGQLAA-----------------------LPPISYPR-GALPWAA 53

  Fly   244 TDTSAAVKRHTAHWAYNDEGFNQHY--GSGYYDRKHMFAYPYPETQFPVGQYWG----------- 295
            |..|.|..:.....|:.  ||:|.|  |||....:...|...||.|   .:::.           
Human    54 TPASCAPAQPAGATAFG--GFSQPYLAGSGPLGLQPPTAKDGPEEQ---AKFYAPEAAAGPEERG 113

  Fly   296 ---PNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSS 357
               |::.|:.:.:.|.||.   :|.::..|...::..|::|.            |:|.|......
Human   114 RTRPSFAPESSLAPAVAAL---KAAKYDYAGVGRATPGSTTL------------LQGAPCAPGFK 163

  Fly   358 SGASG----GLSVGAVG------PCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYV 412
            ....|    .::|.|.|      |..|: ||.........|||||||:|.|..|||.|||.|.::
Human   164 DDTKGPLNLNMTVQAAGVASCLRPSLPD-GLPWGAAPGRARKKRKPYTKQQIAELENEFLVNEFI 227

  Fly   413 SKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
            ::|||.||:..|.|:::||||||||||||.|:
Human   228 NRQKRKELSNRLNLSDQQVKIWFQNRRMKKKR 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 35/55 (64%)
HOXD12NP_067016.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..122 1/19 (5%)
Homeodomain 203..259 CDD:459649 35/55 (64%)

Return to query results.
Submit another query.