DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and HOXD9

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_055028.3 Gene:HOXD9 / 3235 HGNCID:5140 Length:352 Species:Homo sapiens


Alignment Length:369 Identity:111/369 - (30%)
Similarity:140/369 - (37%) Gaps:128/369 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 PTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTA--SV 210
            |.||.||.:                |..||.|.:           |..|...:...||.:|  |.
Human    40 PPGPGAQGR----------------PAGVADGPA-----------ATAAEFASCSFAPRSAVFSA 77

  Fly   211 SPSSVSSQKEDINMSIQLAPLHIP-----AIRAGPGFETDTSAAVKRHTAHWAYNDEGF------ 264
            |.|:|.||.........|...::|     |..:.||          |:...|.....||      
Human    78 SWSAVPSQPPAAAAMSGLYHPYVPPPPLAASASEPG----------RYVRSWMEPLPGFPGGAGG 132

  Fly   265 NQHYGSGYYDRKHMFAYPYPETQFPV-GQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSV 328
            ....|.|...|.     |.|....|. |:::|  .:|:  |.||.|.|         :||:..|.
Human   133 GGGGGGGGPGRG-----PSPGPSGPANGRHYG--IKPE--TRAAPAPA---------TAASTTSS 179

  Fly   329 EGTSTSSYEPPTYSSPGGLRGYPSENYSSSG---------------ASGGLSVGA-VGPCT---- 373
            ..||.||....|..|      ...|:..|||               |:||...|| :|..|    
Human   180 SSTSLSSSSKRTECS------VARESQGSSGPEFSCNSFLQEKAAAATGGTGPGAGIGAATGTGG 238

  Fly   374 ---------------------------------PNPGLHEWTGQVSVRKKRKPYSKFQTLELEKE 405
                                             ||.....|....|.||||.||:|:||||||||
Human   239 SSEPSACSDHPIPGCSLKEEEKQHSQPQQQQLDPNNPAANWIHARSTRKKRCPYTKYQTLELEKE 303

  Fly   406 FLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQ 449
            ||||.|:::.:|:|:||.|.||||||||||||||||.||.|:.:
Human   304 FLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMSKEK 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 39/52 (75%)
HOXD9NP_055028.3 Hox9_act 11..>164 CDD:282473 38/169 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..208 28/105 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 229..276 4/46 (9%)
HOX 285..337 CDD:197696 37/51 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7588
eggNOG 1 0.900 - - E1_KOG0487
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D414477at33208
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11042
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.940

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