DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and HOXD8

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_062458.1 Gene:HOXD8 / 3234 HGNCID:5139 Length:290 Species:Homo sapiens


Alignment Length:244 Identity:67/244 - (27%)
Similarity:91/244 - (37%) Gaps:100/244 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 SAAAAAAYMNEA---------------ERHVSAAARQSVEGTSTSSY--------------EPPT 340
            :||||||...||               .||.:|||...:.|.|.:.:              .||:
Human    15 AAAAAAAAAGEAINPTYYDCHFAPEVGGRHAAAAAALQLYGNSAAGFPHAPPQAHAHPHPSPPPS 79

  Fly   341 YSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNP----------------------------- 376
            .:..||..|...|.:...|.|...:..|..|..|:|                             
Human    80 GTGCGGREGRGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPPCGGIACHGEPAKFYGYDNLQR 144

  Fly   377 ---------------------------------------GLHEWTGQVSV---RKKRKPYSKFQT 399
                                                   .:..|....:.   |:.|:.||:|||
Human   145 QPIFTTQQEAELVQYPDCKSSSGNIGEDPDHLNQSSSPSQMFPWMRPQAAPGRRRGRQTYSRFQT 209

  Fly   400 LELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQR 448
            ||||||||||.|:::::|.|::..|.||||||||||||||||.||.:.:
Human   210 LELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 37/55 (67%)
HOXD8NP_062458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..127 12/66 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..200 2/38 (5%)
Homeodomain 198..254 CDD:459649 37/55 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..290 0/4 (0%)

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