DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and HOXD3

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_008829.3 Gene:HOXD3 / 3232 HGNCID:5137 Length:432 Species:Homo sapiens


Alignment Length:392 Identity:84/392 - (21%)
Similarity:115/392 - (29%) Gaps:157/392 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VLQQQQQQSTPTTHSTPTHAVMYEDP---------PPVPLVAVQQQHLPAPQQQQQLQQQQQQQQ 130
            :|.:|.||:......|...|..||:|         ...........|.|.|              
Human     1 MLFEQGQQALELPECTMQKAAYYENPGLFGGYGYSKTTDTYGYSTPHQPYP-------------- 51

  Fly   131 QQLATTPVAGALSPAQTP-TGPSAQQQQHLTSPHHQ------QLPQQQTPNSVASGASS---NLQ 185
                 .|.|.:......| :..|.|....|.:|.|:      ...:..|.||...|..|   .|.
Human    52 -----PPAAASSLDTDYPGSACSIQSSAPLRAPAHKGAELNGSCMRPGTGNSQGGGGGSQPPGLN 111

  Fly   186 QQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAV 250
            .:||       |.|.....||....||::.                                   
Human   112 SEQQ-------PPQPPPPPPTLPPSSPTNP----------------------------------- 134

  Fly   251 KRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNE 315
                              |.|...:|            |.|   |||......|.:.....:|.|
Human   135 ------------------GGGVPAKK------------PKG---GPNASSSSATISKQIFPWMKE 166

  Fly   316 AERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHE 380
            :.::.......:..|.|.....||                              ||.:       
Human   167 SRQNSKQKNSCATAGESCEDKSPP------------------------------GPAS------- 194

  Fly   381 WTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKN 445
                   ::.|..|:..|.:||||||.||.|:.:.:|.|:|..|.|||||:||||||||||.||:
Human   195 -------KRVRTAYTSAQLVELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKD 252

  Fly   446 SQ 447
            .:
Human   253 QK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 31/55 (56%)
HOXD3NP_008829.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..62 5/37 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..197 36/247 (15%)
Antp-type hexapeptide 160..165 0/4 (0%)
Homeodomain 195..251 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..280 0/2 (0%)
DUF4074 369..430 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..432
Blue background indicates that the domain is not in the aligned region.

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