DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and HOXA3

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_109377.1 Gene:HOXA3 / 3200 HGNCID:5104 Length:443 Species:Homo sapiens


Alignment Length:320 Identity:83/320 - (25%)
Similarity:119/320 - (37%) Gaps:102/320 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 PNSVASGASSNLQQQQQQQNAAV-APGQTQIVAPTTASVSPSSVSSQKEDINM------------ 224
            |...|:|.:.|..||....:||: |.|:..  .|..:..||||.....:...:            
Human    17 PYQAANGFAYNANQQPYPASAALGADGEYH--RPACSLQSPSSAGGHPKAHELSEACLRTLSAPP 79

  Fly   225 ----SIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPE 285
                |:...|||.|..:|.|                                         |.|:
Human    80 SQPPSLGEPPLHPPPPQAAP-----------------------------------------PAPQ 103

  Fly   286 TQFPVGQYWGPNYRPDQTTSAA-----AAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPG 345
            ...|..|       |...|.||     :|:...|.:.....|.|.:|           |..:||.
Human   104 PPQPAPQ-------PPAPTPAAPPPPSSASPPQNASNNPTPANAAKS-----------PLLNSPT 150

  Fly   346 GLRG-YP--------SENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLE 401
            ..:. :|        ::..:||.:||....|...|          .||.|.::.|..|:..|.:|
Human   151 VAKQIFPWMKESRQNTKQKTSSSSSGESCAGDKSP----------PGQASSKRARTAYTSAQLVE 205

  Fly   402 LEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSS 461
            |||||.||.|:.:.:|.|:|..|.|||||:||||||||||.||:.:.:....::...|.|
Human   206 LEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKGKGMLTSSGGQSPS 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 31/55 (56%)
HOXA3NP_109377.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..147 21/130 (16%)
Antp-type hexapeptide 155..160 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..196 9/46 (20%)
Homeodomain 192..248 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 247..338 4/19 (21%)
DUF4074 377..441 CDD:463833
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 400..443
Blue background indicates that the domain is not in the aligned region.

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