DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and HOXA2

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens


Alignment Length:231 Identity:69/231 - (29%)
Similarity:97/231 - (41%) Gaps:51/231 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 PGFETDTSAAVKRHT-AHWAYNDEGFNQHYGS---GYYDRKHMFAYPYPE------TQFPVGQYW 294
            |..:|..|:::|..| :|.......|.|...|   |.:.|......|.|.      :..|.|...
Human    27 PVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGAGGRPKPSPAGSRGSPVPAGALQ 91

  Fly   295 GPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSG 359
            .|.|...:...||...|.:..|    :|||..:..|.:..|::               |:...:.
Human    92 PPEYPWMKEKKAAKKTALLPAA----AAAATAAATGPACLSHK---------------ESLEIAD 137

  Fly   360 ASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNL 424
            .|||.|                      |:.|..|:..|.|||||||.||.|:.:.:|.|:|..|
Human   138 GSGGGS----------------------RRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALL 180

  Fly   425 QLTERQVKIWFQNRRMKNKKNSQRQANQQNNNNNSS 460
            .|||||||:||||||||:|:.:|.:.||.:.....|
Human   181 DLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCKS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 33/55 (60%)
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 10/50 (20%)
Antp-type hexapeptide 94..99 1/4 (25%)
Homeodomain 144..200 CDD:459649 33/55 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 5/19 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279
Blue background indicates that the domain is not in the aligned region.

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