DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and HOXA1

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_005513.2 Gene:HOXA1 / 3198 HGNCID:5099 Length:335 Species:Homo sapiens


Alignment Length:315 Identity:81/315 - (25%)
Similarity:121/315 - (38%) Gaps:74/315 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 SPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMS 225
            ||||......:.|.......|.||.......:...:.|.....||    .||.:: :|:.|::..
Human    63 SPHHHHHHHHRHPQPATYQTSGNLGVSYSHSSCGPSYGSQNFSAP----YSPYAL-NQEADVSGG 122

  Fly   226 IQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPV 290
            .   |...||:.:|     :.|:.:.:|..|        :|.|..|                 .|
Human   123 Y---PQCAPAVYSG-----NLSSPMVQHHHH--------HQGYAGG-----------------AV 154

  Fly   291 GQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENY 355
            |   .|.|            .:.:..:.|.|.|.     .|..:|..|...|.....|...||..
Human   155 G---SPQY------------IHHSYGQEHQSLAL-----ATYNNSLSPLHASHQEACRSPASETS 199

  Fly   356 SSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWEL 420
            |.:.....:.|....|.|...|.:.:.||.:.  .|..::..|..||||||.||.|:::.:|.|:
Human   200 SPAQTFDWMKVKRNPPKTGKVGEYGYLGQPNA--VRTNFTTKQLTELEKEFHFNKYLTRARRVEI 262

  Fly   421 ARNLQLTERQVKIWFQNRRMKNKKNSQR--------------QANQQNNNNNSSS 461
            |.:|||.|.||||||||||||.||..:.              :..::::..:|||
Human   263 AASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPATPPGNDEKAEESSEKSSSS 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 30/55 (55%)
HOXA1NP_005513.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 61..80 5/16 (31%)
Interaction with OGT. /evidence=ECO:0000250|UniProtKB:P09022 75..203 36/185 (19%)
COG5576 176..>286 CDD:227863 43/111 (39%)
Antp-type hexapeptide 204..209 0/4 (0%)
Homeodomain 233..286 CDD:459649 30/52 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 281..335 8/37 (22%)

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