Protein Alignment Abd-B and Hoxc10

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001295565.1
• Gene: Hoxc10 / 315338
• RGDID: 1307250
• Length: 342
• Species: Rattus norvegicus
• Alignment Length: 361
• Identity: 100/361 - (27%)
• Similarity: 150/361 - (41%)
• Gaps: 88/361 - (24%)

  Fly   168 PQQQTPNSVAS-----------GASSNLQQQQQQQ-NAAVAPGQTQIVAPTTASVSPSSVSSQKE 220
            |:..||||.|.           ..|:.:..|.... |..|..|         ..::| |:|.:.|
  Rat     4 PRNVTPNSYAEPLAAPGGGERYNRSAGMYMQSGSDFNCGVMRG---------CGLAP-SLSKRDE 58

  Fly   221 --DINMSIQLAPLHIPAIRAGPGFETDTSAA------VKRHTAHWAYNDEGFNQHYGSGYYDRKH 277
              ..|:::...|.::..:.:.    .|..||      |.|..:..:|......::....|...|.
  Rat    59 GGSPNLALNTYPSYLSQLDSW----GDPKAAYRLEQPVGRPLSSCSYPPSVKEENVCCMYSAEKR 119

  Fly   278 --------MFAYPYPET-----QFPVGQYW--GPNYRP-DQTTSAAAA---------AAYMNEAE 317
                    ::::|.||:     :.||..|:  .|:|.. |:|...|.|         .|.:|...
  Rat   120 AKSGPEAALYSHPLPESCLGEHEVPVPSYYRASPSYSALDKTPHCAGANEFEAPFEQRASLNPRT 184

  Fly   318 RHVSA---AARQSVEGTSTSSYEPP------TYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCT 373
            .|:.:   ..:.|...|..|..:.|      |..|..|.:..|||:......:...|     |.|
  Rat   185 EHLESPQLGGKVSFPETPKSDSQTPSPNEIKTEQSLVGPKASPSESEKERAKTADSS-----PDT 244

  Fly   374 PNPGLHE----------WTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTE 428
            .:....|          |....|.||||.||:|.||||||||||||.|:::::|.|:::.:.||:
  Rat   245 SDNEAKEEIKAENTTGNWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISKTINLTD 309

  Fly   429 RQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSSNHN 464
            |||||||||||||.||     .|::|.....:||.|
  Rat   310 RQVKIWFQNRRMKLKK-----MNRENRIRELTSNFN 340

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	35/52 (67%)
Hoxc10	NP_001295565.1	COG5576	221..>331	CDD:227863	50/119 (42%)
		Homeobox	271..325	CDD:395001	35/53 (66%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	92	1.000	Domainoid score	I7402
eggNOG	1	0.900	-	-		E1_KOG0487
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D414477at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm44776
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45874
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	6	6.010