Protein Alignment Abd-B and Hoxc13

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: XP_235695.3
• Gene: Hoxc13 / 315337
• RGDID: 1563984
• Length: 328
• Species: Rattus norvegicus
• Alignment Length: 307
• Identity: 81/307 - (26%)
• Similarity: 117/307 - (38%)
• Gaps: 91/307 - (29%)

  Fly   193 AAVAPGQTQIVAPTTASVSPSSVSSQKEDI----NMSIQLAPL---------HIPAIRAG----- 239
            :..:||:    ||:...:..|..:|...|:    .::...|||         .|||..|.
  Rat    45 SGASPGK----APSMDGLGGSCPASHCRDLLPHPVLARPPAPLGAPQGAVYTDIPAPEAARQCAP 105

  Fly   240 -PGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYY----------DRKHMFAYP---YPETQFPV 290
             |...|.:||.:            |:...:|..||          .:|....:|   |||   |.
  Rat   106 PPAPPTSSSATL------------GYGYPFGGSYYGCRLSHNVNLQQKPCSYHPGDKYPE---PS 155

  Fly   291 GQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPS--- 352
            |...|     |..:|.|...|:...     .|::.|::.|....|..|       |:.|:|.
  Rat   156 GALPG-----DDLSSRAKEFAFYPS-----FASSYQAMPGYLDVSVVP-------GISGHPEPRH 203

  Fly   353 ------ENYSSSGASGGLSVGAVGPCTPNPGLHEWTG----------QVSV----RKKRKPYSKF 397
                  |.|.....|.|...........:...|.|..          :||.    ||||.||:|.
  Rat   204 DALIPVEGYQHWALSNGWDSQVYCSKEQSQSAHLWKSPFPDVVPLQPEVSSYRRGRKKRVPYTKV 268

  Fly   398 QTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
            |..|||||:..:.:::|:||..::....|:||||.|||||||:|.||
  Rat   269 QLKELEKEYAASKFITKEKRRRISATTNLSERQVTIWFQNRRVKEKK 315

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	27/52 (52%)
Hoxc13	XP_235695.3	HoxA13_N	52..164	CDD:289085	29/131 (22%)
		HOX	258..310	CDD:197696	26/51 (51%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0487
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900