Protein Alignment Abd-B and vnd

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_476786.2
• Gene: vnd / 31003
• FlyBaseID: FBgn0261930
• Length: 723
• Species: Drosophila melanogaster
• Alignment Length: 500
• Identity: 121/500 - (24%)
• Similarity: 173/500 - (34%)
• Gaps: 159/500 - (31%)

  Fly    35 AHHHLPQPLHTTSHHHSAHPHLQQQQQQQQH---AVVASSPSSVLQQQQQQSTPT--------TH 88
            |||      .:...||||.......:.|..|   :.::.:|:.|...:....:.|        .|
  Fly   224 AHH------GSDLSHHSASESTSGHRGQGSHTSPSALSPTPAGVSADEHHNGSGTGGGAGEADHH 282

  Fly    89 STPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQ----QLQQQQQQQQQQLATTPVAGALSPAQTPT 149
            ||..|    ..||..|    ||||   |..||    .|...||..||.:|..|:|
  Fly   283 STTEH----HAPPSHP----QQQH---PHHQQHHHPHLLLPQQHHQQAVAPLPLA---------- 326

  Fly   150 GPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSS 214
                         |||....|...::.|: |:..|........||||.||   ..|......|.|
  Fly   327 -------------HHQSGEAQSHAHANAA-AAHLLASHNAAAAAAVAAGQ---YLPNLPKNFPGS 374

  Fly   215 VSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMF 279
            ...:....:...|                     .:.:|:...|:..|  |:.||:
  Fly   375 FGDEMSSYHHMAQ---------------------TMLQHSGRSAWIKE--NELYGT--------- 407

  Fly   280 AYP-YPETQFPVGQ-----YWGPNYRPDQTTSAAAAAAYMNEAERHVSAA-----ARQSVEGTS- 332
            ..| .|::..||..     |.|.|.:    ||.|.:..|.:.:....|.|     |..::.|:|
  Fly   408 QQPASPDSTSPVTSEVSYTYIGSNCQ----TSPALSGDYKSYSRSADSDALSVGDALHTLHGSSG 468

  Fly   333 --TSSYEPPTYS----------------SPGGLRGYPSENYSS----------------SGASGG 363
              ::...|..::                ...|:.|..|.:..|                .|:.||
  Fly   469 NGSAGGAPTAHALHNNNNNTTNNNNHSLKAEGINGAGSGHDDSLNEDGIEEDIDDVDDADGSGGG 533

  Fly   364 LSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTE 428
            .:.|:.|  .||          ..||:|..::|.||.|||:.|....|:|..:|..||..::||.
  Fly   534 DANGSDG--LPN----------KKRKRRVLFTKAQTYELERRFRQQRYLSAPEREHLASLIRLTP 586

  Fly   429 RQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSSNHNHAQATQQHH 473
            .||||||||.|.|.|    |..|::....:....|.|  ||..||
  Fly   587 TQVKIWFQNHRYKTK----RAQNEKGYEGHPGLLHGH--ATHPHH 625

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	27/55 (49%)
vnd	NP_476786.2	Homeodomain	546..602	CDD:459649	28/59 (47%)