DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and dlx3b

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_571397.2 Gene:dlx3b / 30585 ZFINID:ZDB-GENE-980526-280 Length:269 Species:Danio rerio


Alignment Length:309 Identity:70/309 - (22%)
Similarity:100/309 - (32%) Gaps:132/309 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 PGFETDTSAAVKRHTA--------HWAYNDEGF----NQHYGSGYYDRK----HMF--------- 279
            ||..||.|.::..|..        ..:..|.|:    :::|.|..|.::    |.|         
Zfish    11 PGISTDLSGSMSCHPTSKDSPTLPESSATDMGYYSSHHEYYQSPPYPQQMNSYHQFNLSGMGATP 75

  Fly   280 -AYPYPETQFPVGQY--WGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTY 341
             ||| .:|::|...|  :| :|..|..|...:|.....|.|..:                     
Zfish    76 GAYP-TKTEYPYNTYRQYG-HYNRDLQTPPQSAVKEEPETEVRM--------------------- 117

  Fly   342 SSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEF 406
                 :.|.|.:                                 :||.|..||.:|...|::.|
Zfish   118 -----VNGKPKK---------------------------------IRKPRTIYSSYQLAALQRRF 144

  Fly   407 LFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK---------------------NSQRQA 450
            ....|::..:|.|||..|.||:.||||||||||.|.||                     ||....
Zfish   145 QKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNASDSMACNSPPSP 209

  Fly   451 NQQNNNNNSS----------------------SNHNHAQATQQHHSGHH 477
            ...:||.:||                      |||.:.|.:...|..||
Zfish   210 AVWDNNAHSSQVNRGQIPQPPLSSTPPYMEDYSNHWYQQGSHLQHPVHH 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 27/55 (49%)
dlx3bNP_571397.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 6/29 (21%)
DLL_N 28..104 CDD:463567 17/77 (22%)
Homeodomain 126..182 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..242 6/50 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 250..269 3/9 (33%)

Return to query results.
Submit another query.