Protein Alignment Abd-B and hoxc3a

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001128157.3
• Gene: hoxc3a / 30421
• ZFINID: ZDB-GENE-980526-532
• Length: 263
• Species: Danio rerio
• Alignment Length: 133
• Identity: 47/133 - (35%)
• Similarity: 68/133 - (51%)
• Gaps: 14/133 - (10%)

  Fly   323 AARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSV 387
            |...|....||..|  |.......|..:.|.|...||.|...:..||            ....|.
Zfish   108 ACELSTSCLSTMKY--PWMRETHELMHFSSINAMESGDSKYSNGEAV------------VRNSSS 158

  Fly   388 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQ 452
            ::.|..::..|.|||||||.|:||:.:.:|.|:|..|:||:||:||||||||||.||:.:.::..
Zfish   159 KRARVAFTSSQLLELEKEFHFSAYLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKKDHKEKSTA 223

  Fly   453 QNN 455
            :::
Zfish   224 KSS 226

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	30/55 (55%)
hoxc3a	NP_001128157.3	None