DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and pou3f2b

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_571235.1 Gene:pou3f2b / 30397 ZFINID:ZDB-GENE-980526-370 Length:378 Species:Danio rerio


Alignment Length:438 Identity:88/438 - (20%)
Similarity:130/438 - (29%) Gaps:130/438 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TTSHHHSAHPHLQQQQQQQQHAVVASSPSSVLQQQQQQSTPTTHSTP---THAVMYEDPPPVPLV 106
            |.|:|::               ::.||||.|            ||.|   ..|..|.|       
Zfish     4 TASNHYN---------------ILTSSPSIV------------HSEPGSMQQATAYRD------- 34

  Fly   107 AVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALSP-AQTPTG-----PSAQQQQHLTSPHHQ 165
               .|.|.......|..........|..|....|...| :.:|.|     |:.|.          
Zfish    35 ---AQTLLQSDYSLQSNSHPLSHAHQWITALSHGEGGPWSSSPLGEQDIKPAVQS---------- 86

  Fly   166 QLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQT-------QIVAPTTASVSPSSVSSQKEDIN 223
              |:.:..|      |||||.|.:..:..   .||       :....|||:..||..:|..:.: 
Zfish    87 --PRDEMHN------SSNLQHQSRPPHLV---HQTHGNHHDSRAWRTTTAAHIPSMATSNGQSL- 139

  Fly   224 MSIQLAPLHIPAIRAGPGFETD-----TSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPY 283
                        |.:.|.|..:     :...:..|:...|:.|     |:.....|..|    |.
Zfish   140 ------------IYSQPSFSVNGLIPGSGQGIHHHSMRDAHED-----HHSPHLSDHGH----PP 183

  Fly   284 PETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLR 348
            .:.|....|....:...|..||...........:|.:.....|:..|.:..:.....:|.....|
Zfish   184 SQHQHQSHQSHHDHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICR 248

  Fly   349 GYPSENYSSSGASGGLSVGAVGPCTPNPGLHEW-----------------TGQVSVRKKRKPYSK 396
                        ...|.:.....|...|.|::|                 ..|...||||.....
Zfish   249 ------------FEALQLSFKNMCKLKPLLNKWLEEADSTSGSPTSLDKIAAQGRKRKKRTSIEV 301

  Fly   397 FQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
            .....||..||.....:..:...||.:|||.:..|::||.|||.|.|:
Zfish   302 SVKGALESHFLKCPKPAASEITSLADSLQLEKEVVRVWFCNRRQKEKR 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 18/52 (35%)
pou3f2bNP_571235.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 11/50 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..118 10/52 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..205 10/62 (16%)
POU 200..274 CDD:197673 13/85 (15%)
Homeobox 295..348 CDD:278475 18/52 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..378 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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