DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and hoxb9a

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_571196.2 Gene:hoxb9a / 30344 ZFINID:ZDB-GENE-990415-109 Length:249 Species:Danio rerio


Alignment Length:260 Identity:83/260 - (31%)
Similarity:118/260 - (45%) Gaps:44/260 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 SSVSSQKEDINMS----IQLAPLHIPAIRAGPGFETD-TSAAVKRHTAHWAYNDEGFNQHYGSGY 272
            |.:|.:.||.|.|    :|.:....|    |||...: .|.:.:.....::.:...|:.|..:|.
Zfish    14 SIISHEGEDPNASRFSNVQYSSARQP----GPGEHPEFPSCSFQPKPPVFSSSWSPFSSHASNGL 74

  Fly   273 YDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSY- 336
            ....|    ||..||            |..:|.......:::.|.|......:..|:......: 
Zfish    75 PAVYH----PYIPTQ------------PVPSTDTRYLRTWLDCAPRAEPLPGQGQVKMEPLLGHL 123

  Fly   337 -EPPTYSSPGGLRGYPSENYSSSGASGGLSVG-------------AVGPCTPNPGLHEWTGQVSV 387
             |||...   |...|..|:.::...:.|.|.|             ..||...:|..: |....|.
Zfish   124 GEPPKLV---GQHEYILESSTAREINSGHSAGFEDNKDICEGSEDKEGPDQNDPSAN-WLHARSS 184

  Fly   388 RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQ 452
            ||||.||:|:||||||||||||.|:::.:|.|:||.|.||||||||||||||||.||.::.|..:
Zfish   185 RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLTERQVKIWFQNRRMKMKKMNKDQPKE 249

  Fly   453  452
            Zfish   250  249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 39/52 (75%)
hoxb9aNP_571196.2 Hox9_act 1..171 CDD:282473 36/179 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..182 7/36 (19%)
Homeobox 187..240 CDD:278475 39/52 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7557
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D414477at33208
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 1 1.000 - - otm24582
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.010

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