Protein Alignment Abd-B and hoxd4a

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001119917.1
• Gene: hoxd4a / 30329
• ZFINID: ZDB-GENE-980526-214
• Length: 256
• Species: Danio rerio
• Alignment Length: 228
• Identity: 71/228 - (31%)
• Similarity: 98/228 - (42%)
• Gaps: 38/228 - (16%)

  Fly   259 YNDEGFNQHYGSGYYDRKHMFAYPYPETQFP-VGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSA 322
            |:...:......|||.       |..:|.|. .|.|...|| .:|..|.:.......:...||..
Zfish    43 YSQNSYIPEQSPGYYS-------PSQDTDFQHPGIYSRSNY-SEQPYSCSTVQGSSVQPRGHVQD 99

  Fly   323 AARQSVEGTSTSSYEP------PTYSSPGGLRGYPSENYSSSGASGGLSVGAVGP-------CTP 374
            .|       ||.|..|      |.....|...|...:|..:...........|.|       .|.
Zfish   100 QA-------STPSPFPAQTEQCPAVQISGSRTGGQQQNTKTQNGIPTKQPAVVYPWMKKVHVTTV 157

  Fly   375 NPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRR 439
            ||   ::||. ..::.|..|::.|.|||||||.||.|:::::|.|:|..|.|:|||:||||||||
Zfish   158 NP---DYTGP-EPKRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRR 218

  Fly   440 MKNKKNSQRQANQQNNNNNSSS-NHNHAQATQQ 471
            ||.||:.:    ..|....|:| .:.|||..|:
Zfish   219 MKWKKDHK----LPNTKGRSASVGNQHAQHAQK 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	31/55 (56%)
hoxd4a	NP_001119917.1	Homeodomain	167..223	CDD:459649	31/55 (56%)