Protein Alignment Abd-B and Hoxc12

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001100266.1
• Gene: Hoxc12 / 300262
• RGDID: 1310539
• Length: 280
• Species: Rattus norvegicus
• Alignment Length: 318
• Identity: 83/318 - (26%)
• Similarity: 119/318 - (37%)
• Gaps: 128/318 - (40%)

  Fly   151 PSAQ-----QQQHLTSPHHQQLPQQQT-------------PNSVASGASSNLQQQQQQQNAAVAP 197
            |||:     .|.:|.||.....|..:|             ....|.|....|:::::.:.....|
  Rat    56 PSAEPCNGYPQPYLGSPVSLNPPFGRTCELARVEDSKGYYREPCAEGGGGGLKREERGREPGAGP 120

  Fly   198 GQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDE 262
            |..                        .:||.|...||:    ||:.|..|
  Rat   121 GAA------------------------LLQLEPSGPPAL----GFKYDYPA-------------- 143

  Fly   263 GFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPD--QTTSAAAAAAYMNEAERHVSAAAR 325
                  |.|..|..                 .||.:.|.  |:..:.::::.:||..:..||.
  Rat   144 ------GGGGGDGN-----------------TGPPHDPPSCQSLESDSSSSLLNEGNKGASAG-- 183

  Fly   326 QSVEGTSTSSYEPPTYSSP----GGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVS 386
                       :|.:..||    |||        |:|||          |..|   :|..:
  Rat   184 -----------DPGSLVSPLNPGGGL--------SASGA----------PWYP---IHSRS---- 212

  Fly   387 VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
             |||||||||.|..|||.|||.|.::::|:|.||:..|.|:::||||||||||||.|:
  Rat   213 -RKKRKPYSKLQLAELEGEFLVNEFITRQRRRELSDRLNLSDQQVKIWFQNRRMKKKR 269

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	33/52 (63%)
Hoxc12	NP_001100266.1	homeodomain	213..269	CDD:238039	35/55 (64%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0487
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X5302
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
	4	3.860