Protein Alignment Abd-B and Hoxd13

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001099356.1
• Gene: Hoxd13 / 288154
• RGDID: 1308417
• Length: 331
• Species: Rattus norvegicus
• Alignment Length: 350
• Identity: 94/350 - (26%)
• Similarity: 138/350 - (39%)
• Gaps: 83/350 - (23%)

  Fly   139 AGALSPAQTPTGPSA--QQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQ 201
            ||| :||.:.:..:|  |.:..|::|             |.:|..|..........||.|...:.
  Rat    11 AGA-APASSSSSVAAPGQCRGFLSAP-------------VFAGTHSGRAAAAAAAAAAAAAAASS 61

  Fly   202 IVAPTTASVSPSSVSSQKEDINMSIQLAPL--HIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGF 264
            ...|.|:..:.||.||....:..:...||:  ..||..|..     |:||.....|      .|:
  Rat    62 FAYPGTSERTGSSSSSSSSAVIATRPEAPVAKECPAPAAAA-----TAAAPPGAPA------LGY 115

  Fly   265 NQHYGSGYY----------DRKHMFAYPYPET-QFPVGQYWGPNYRPDQTTSAAAAAAYMNEAER 318
            ..|:|:|||          .:..:.:.|:... .|||.:|.       ..:..|:::...||
  Rat   116 GYHFGNGYYSCRMSHGVGLQQNALKSSPHASLGGFPVEKYM-------DVSGLASSSVPTNE--- 170

  Fly   319 HVSAAARQSVEGTSTSSYEPPTYSSPGGL-------RGYP-------SENYSSSGASGGLSVGAV 369
             |.|.|:   |.:....|..|....||.:       .|.|       .|.|.|...:.|.:....
  Rat   171 -VPARAK---EVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVY 231

  Fly   370 GPCTPNPGLHEW----TGQVSV-----------RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWE 419
            .......|.|.|    .|.|::           ||||.||:|.|..|||.|:..|.:::|.||..
  Rat   232 CAKDQPQGSHFWKSSFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKELENEYAINKFINKDKRRR 296

  Fly   420 LARNLQLTERQVKIWFQNRRMKNKK 444
            ::....|:||||.|||||||:|:||
  Rat   297 ISAATNLSERQVTIWFQNRRVKDKK 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	27/52 (52%)
Hoxd13	NP_001099356.1	HoxA13_N	<113..162	CDD:289085	11/55 (20%)
		homeodomain	265..321	CDD:238039	29/55 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0487
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900