Protein Alignment Abd-B and Dlx3

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001099302.1
• Gene: Dlx3 / 287638
• RGDID: 1304875
• Length: 287
• Species: Rattus norvegicus
• Alignment Length: 272
• Identity: 68/272 - (25%)
• Similarity: 100/272 - (36%)
• Gaps: 89/272 - (32%)

  Fly   271 GYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSS 335
            |||..        |:..:..||.:|....|           |....:.:::..|       .|.:
  Rat    41 GYYSA--------PQHDYYSGQPYGQTVNP-----------YTYHHQFNLNGLA-------GTGA 79

  Fly   336 YEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCT----PNPGLHEWTGQ-VSVRKKRKPYS 395
            |.|.:..:.||       :|...||.....:.|..|.:    |...:....|: ..|||.|..||
  Rat    80 YSPKSEYTYGG-------SYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYS 137

  Fly   396 KFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNK---KNSQRQANQQNNNN 457
            .:|...|::.|....|::..:|.|||..|.||:.||||||||||.|.|   ||.:.......||:
  Rat   138 SYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNS 202

  Fly   458 NS-------------SSNHNHAQATQ--------------------------QHHSGHHLN---- 479
            :|             :|:|:....|:                          |:.||.||.
  Rat   203 DSMACNSPPSPALWDTSSHSTPAPTRNPLPPPLPYSASPNYLDDPTNSWYHTQNLSGPHLQQQPP 267

  Fly   480 --LSLNMGHHAA 489
              .:|   |||:
  Rat   268 QPATL---HHAS 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	28/58 (48%)
Dlx3	NP_001099302.1	DLL_N	27..107	CDD:463567	19/98 (19%)
		COG5576	<109..230	CDD:227863	39/120 (33%)
		Homeodomain	130..186	CDD:459649	27/55 (49%)