Protein Alignment Abd-B and ind

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 435
• Identity: 103/435 - (23%)
• Similarity: 156/435 - (35%)
• Gaps: 171/435 - (39%)

  Fly    51 SAHPHLQQQQQQQQHAVVASSPSSVLQQQQQQSTPTTHSTPTHAVMYEDPPPVPLVAVQQQHLPA 115
            |..|:|.|::::      ..||.         .:||..:....|.|.   |.:|:       ||.
  Fly    12 SDRPNLSQKKEK------LGSPG---------GSPTAAAAVAAAAML---PSIPM-------LPY 51

  Fly   116 PQQQ----------QQLQQQQQQQQQQLATTPVAGALSPAQTPTGPSAQQQQHLTS-------PH 163
            |...          ||.|||||||||..|....|.|.:.|       .||..|::|       |:
  Fly    52 PASYVGSYLFSLGIQQQQQQQQQQQQHAAAAAAAAAAAAA-------LQQHPHVSSSPGSLYHPY 109

  Fly   164 HQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQL 228
            .|....::.    :||.|:       .:....:|         ..|.:|:|.           ||
  Fly   110 AQLFASKRK----SSGFSN-------YEGCYPSP---------PLSANPNSQ-----------QL 143

  Fly   229 APLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQY 293
            .|:|                                 ..|||..     :...|.||.
  Fly   144 PPIH---------------------------------NLYGSPV-----VGGLPLPEP------- 163

  Fly   294 WGPNYRPDQTTSAAAAAAYMNEAE-------RHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYP 351
              .::....:.|::|:..|.|..:       :|.|:.:..|                      .|
  Fly   164 --GSFCTSPSASSSASLDYTNNFDEPQGKRFKHESSCSPNS----------------------SP 204

  Fly   352 SENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQK 416
            .:|:||.           ||....|.::::..  |.::.|..::..|.||||:||..|||:|:.:
  Fly   205 LKNHSSG-----------GPVEITPLINDYAD--SSKRIRTAFTSTQLLELEREFSHNAYLSRLR 256

  Fly   417 RWELARNLQLTERQVKIWFQNRRMKNKKNSQRQA--NQQNNNNNS 459
            |.|:|..|:|:|:||||||||||:|.||......  |...|:|.|
  Fly   257 RIEIANRLRLSEKQVKIWFQNRRVKQKKGGSESPTFNLSTNSNGS 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	29/55 (53%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	29/55 (53%)