DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and Dlx5

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_037075.1 Gene:Dlx5 / 25431 RGDID:2506 Length:289 Species:Rattus norvegicus


Alignment Length:280 Identity:73/280 - (26%)
Similarity:111/280 - (39%) Gaps:79/280 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 IPAIRAGPGFET--DTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWG 295
            :|:||:| .|:.  .||||:                |:.|       ..:...||:......|:.
  Rat     9 VPSIRSG-DFQAPFPTSAAM----------------HHPS-------QESPTLPESSATDSDYYS 49

  Fly   296 PNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGA 360
            |        :.||...|.:.    .||:.|:::     :.|:...:|..|...|||::.|:..|.
  Rat    50 P--------AGAAPHGYCSP----TSASYRKAL-----NPYQYQYHSVNGSAAGYPAKAYADYGY 97

  Fly   361 SG-----GLSVGAVGPCTPNPGLHEWTGQV--------SVRKKRKPYSKFQTLELEKEFLFNAYV 412
            :.     |.:...|...|..|.......:|        .|||.|..||.||...|::.|....|:
  Rat    98 ASPYHQYGGAYNRVPSATSQPEKEVAEPEVRMVNGKPKKVRKPRTIYSSFQLAALQRRFQKTQYL 162

  Fly   413 SKQKRWELARNLQLTERQVKIWFQNRRMKNKK---------------------NSQRQAN--QQN 454
            :..:|.|||.:|.||:.||||||||:|.|.||                     ||.:...  :..
  Rat   163 ALPERAELAASLGLTQTQVKIWFQNKRSKIKKIMKNGEMPPEHSPSSSDPMACNSPQSPAVWEPQ 227

  Fly   455 NNNNSSSNHNHAQATQQHHS 474
            .::.|.|:|.||..|..:.|
  Rat   228 GSSRSLSHHPHAHPTTSNQS 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 27/55 (49%)
Dlx5NP_037075.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49 14/63 (22%)
DLL_N 32..118 CDD:463567 21/102 (21%)
Homeodomain 138..194 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..253 9/50 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..289
Blue background indicates that the domain is not in the aligned region.

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