DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and phx1

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_593776.1 Gene:phx1 / 2542405 PomBaseID:SPAC32A11.03C Length:942 Species:Schizosaccharomyces pombe


Alignment Length:82 Identity:29/82 - (35%)
Similarity:41/82 - (50%) Gaps:6/82 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   373 TPNPGLHEWTGQVSVRK-KRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQ 436
            ||..|     |..|..| |::..:..|...|.:||..:.......|.::.|.|.:.||.|.||||
pombe   156 TPESG-----GSTSAPKSKKQRLTADQLAYLLREFSKDTNPPPAIREKIGRELNIPERSVTIWFQ 215

  Fly   437 NRRMKNKKNSQRQANQQ 453
            |||.|:|..|:||..::
pombe   216 NRRAKSKLISRRQEEER 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 20/56 (36%)
phx1NP_593776.1 COG5576 116..272 CDD:227863 29/82 (35%)

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