Protein Alignment Abd-B and Hoxc6

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: XP_063119084.1
• Gene: Hoxc6 / 252885
• RGDID: 620626
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 65/212 - (30%)
• Similarity: 97/212 - (45%)
• Gaps: 48/212 - (22%)

  Fly   258 AYNDEGFNQHYG----SGYYDRKHMFAYP-------YPETQFPVGQYWGPNYRPDQTTSAAAAAA 311
            :|..|...::||    || :...|...||       |||.|:......||.    .:.:...|.|
  Rat    27 SYIPEHSPEYYGRTRESG-FQHHHQELYPPPPPRPSYPERQYSCTSLQGPG----NSRAHGPAQA 86

  Fly   312 YMNEAERHVSAAARQSVEGTSTS-SYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPN 375
            ..:..|:.........:.|.|.| |..||..|.       |:.::.||.||            ..
  Rat    87 GHHHPEKSQPLCEPAPLSGASASPSPAPPACSQ-------PAPDHPSSAAS------------KQ 132

  Fly   376 PGLHEWTGQVSV------------RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTE 428
            |.::.|..::.|            ::.|..|::.|.|||||||.:|.|:::::|.|:|.:|.|:|
  Rat   133 PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSE 197

  Fly   429 RQVKIWFQNRRMKNKKN 445
            ||:||||||||||.||:
  Rat   198 RQIKIWFQNRRMKWKKD 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	30/55 (55%)
Hoxc6	XP_063119084.1	None