Protein Alignment Abd-B and Gbx1

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001258382.1
• Gene: Gbx1 / 246149
• RGDID: 621864
• Length: 425
• Species: Rattus norvegicus
• Alignment Length: 320
• Identity: 84/320 - (26%)
• Similarity: 121/320 - (37%)
• Gaps: 74/320 - (23%)

  Fly   141 ALSPAQTPTG-----PSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQT 200
            ||:||..|.|     |.|.....|::.....| .|..|:.||  .::.|....:..:|...|.:
  Rat   119 ALAPAPLPAGLPPLAPLASFAGRLSNTFCAGL-GQAVPSMVA--LTTALPSFAEPPDAYYGPPE- 179

  Fly   201 QIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFN 265
              :|...|:.:.|:||....:        |   ||.|.....:.|.....
  Rat   180 --LAAAAAAAAASTVSRSNPE--------P---PARRTDGALDADELLPA--------------- 216

  Fly   266 QHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAA------ 324
                     |:.:...|.|....|      |::.....:..|....|.::.|:....|.
  Rat   217 ---------REKVTEPPPPPPPPP------PHFSETFPSLPAEGKVYSSDEEKLEPPAGEPAGSE 266

  Fly   325 --RQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSS---GASGGLSVGAVGPCTPNPGLHEWTGQ 384
              .:...|.|..|:...:...||.|.| |......|   ||..|..| |.|..||        |.
  Rat   267 PEEEGSGGDSEDSFLDSSAGGPGALLG-PKPKLKGSLGTGAEEGTPV-ATGVTTP--------GG 321

  Fly   385 VSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
            .| |::|..::..|.|||||||....|:|..:|.::|..|:|:|.||||||||||.|.|:
  Rat   322 KS-RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	28/55 (51%)
Gbx1	NP_001258382.1	Homeodomain	324..380	CDD:459649	28/55 (51%)