Protein Alignment Abd-B and Hoxc4

DIOPT Version :9

• Sequence 1: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001103354.1
• Gene: Hoxc4 / 24459
• RGDID: 1586210
• Length: 264
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 65/212 - (30%)
• Similarity: 97/212 - (45%)
• Gaps: 48/212 - (22%)

  Fly   258 AYNDEGFNQHYG----SGYYDRKHMFAYP-------YPETQFPVGQYWGPNYRPDQTTSAAAAAA 311
            :|..|...::||    || :...|...||       |||.|:......||.    .:.:...|.|
  Rat    27 SYIPEHSPEYYGRTRESG-FQHHHQELYPPPPPRPSYPERQYSCTSLQGPG----NSRAHGPAQA 86

  Fly   312 YMNEAERHVSAAARQSVEGTSTS-SYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPN 375
            ..:..|:.........:.|.|.| |..||..|.       |:.::.||.||            ..
  Rat    87 GHHHPEKSQPLCEPAPLSGASASPSPAPPACSQ-------PAPDHPSSAAS------------KQ 132

  Fly   376 PGLHEWTGQVSV------------RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTE 428
            |.::.|..::.|            ::.|..|::.|.|||||||.:|.|:::::|.|:|.:|.|:|
  Rat   133 PIVYPWMKKIHVSTVNPNYNGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRIEIAHSLCLSE 197

  Fly   429 RQVKIWFQNRRMKNKKN 445
            ||:||||||||||.||:
  Rat   198 RQIKIWFQNRRMKWKKD 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	30/52 (58%)
Hoxc4	NP_001103354.1	Homeobox	159..213	CDD:395001	30/53 (57%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000