DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and ceh-5

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_492586.2 Gene:ceh-5 / 191616 WormBaseID:WBGene00000430 Length:134 Species:Caenorhabditis elegans


Alignment Length:92 Identity:31/92 - (33%)
Similarity:47/92 - (51%) Gaps:13/92 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 EWTGQVSVRKKRKPYSKF---QTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMK 441
            |...::.:.:.::|.:.|   |..:||:.|..:.|:|...|.:||.:|.|::.|||:||||||.|
 Worm    25 EIPAKLDLERPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLSDNQVKVWFQNRRTK 89

  Fly   442 NKKNSQRQ----------ANQQNNNNN 458
            .||...|.          .|.||...|
 Worm    90 QKKIDSRDPIKPETLKPAENYQNVYQN 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 23/58 (40%)
ceh-5NP_492586.2 Homeodomain 36..92 CDD:459649 23/55 (42%)

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