DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and Pou3f2

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_032925.1 Gene:Pou3f2 / 18992 MGIID:101895 Length:445 Species:Mus musculus


Alignment Length:490 Identity:101/490 - (20%)
Similarity:138/490 - (28%) Gaps:246/490 - (50%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQQHHLQQQQQQQQQQEQQHLQEQQQHLQQLH--HHA--HH-------------HLP-------- 40
            :||.|.||||||||||:||..|:|||..:..|  |||  ||             |||        
Mouse   124 LQQQHQQQQQQQQQQQQQQQQQQQQQQQRPPHLVHHAANHHPGPGAWRSAAAAAHLPPSMGASNG 188

  Fly    41 -----QPLHTTS------------HHHSAHPHLQQQQQQQQHAVVASSPSSVLQQQQQQSTPTTH 88
                 ||..|.:            |||.    |:....:..||               ...|..|
Mouse   189 GLLYSQPSFTVNGMLGAGGQPAGLHHHG----LRDAHDEPHHA---------------DHHPHPH 234

  Fly    89 STPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALSPAQTPTG-PS 152
            |.|     ::.|||.|                                       |.|.|.| |.
Mouse   235 SHP-----HQQPPPPP---------------------------------------PPQGPPGHPG 255

  Fly   153 AQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSS 217
            |         ||.....:.||      .|.:|:|..:|                           
Mouse   256 A---------HHDPHSDEDTP------TSDDLEQFAKQ--------------------------- 278

  Fly   218 QKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRKHMFAYP 282
                                                          |.|        |:....:.
Mouse   279 ----------------------------------------------FKQ--------RRIKLGFT 289

  Fly   283 YPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGL 347
            ..:....:|..:|..:  .|||.....|..:                     |::......| .|
Mouse   290 QADVGLALGTLYGNVF--SQTTICRFEALQL---------------------SFKNMCKLKP-LL 330

  Fly   348 RGYPSENYSSSGASGGL-SVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLE--LEKEFLFN 409
            ..:..|..||||:...: .:.|.|                 ||::|..|...:::  ||..||..
Mouse   331 NKWLEEADSSSGSPTSIDKIAAQG-----------------RKRKKRTSIEVSVKGALESHFLKC 378

  Fly   410 AYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKK 444
            ...|.|:...||.:|||.:..|::||.|||.|.|:
Mouse   379 PKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKR 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 20/54 (37%)
Pou3f2NP_032925.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 64..173 25/48 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..269 24/143 (17%)
POU 264..338 CDD:197673 19/184 (10%)
Homeobox 359..413 CDD:395001 20/53 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 411..445 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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