Protein Alignment Abd-B and php-3

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_499573.1
• Gene: php-3 / 176640
• WormBaseID: WBGene00004024
• Length: 275
• Species: Caenorhabditis elegans
• Alignment Length: 385
• Identity: 115/385 - (29%)
• Similarity: 147/385 - (38%)
• Gaps: 137/385 - (35%)

  Fly    74 SVLQQQQQQST---PTTHSTPTHAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLAT 135
            ||:||....|.   |...|:.:|....|.|                                  |
 Worm     3 SVMQQMMNNSNMPPPFVKSSDSHETHDESP----------------------------------T 33

  Fly   136 TP-VAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNS-VASG----ASSNLQQQQQQQNAA 194
            :| :..:.|||.|.:..:|..|.:..|....||.|..:.:| |:||    ||:||.:.|...:
 Worm    34 SPFIKRSDSPATTSSAAAAAMQHNFWSTRAAQLQQSVSGSSGVSSGSSSSASNNLSRTQADNH-- 96

  Fly   195 VAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAY 259
                                 |.:..|...|.|:|||     ....|.....:||..
 Worm    97 ---------------------SERGSDTASSPQVAPL-----PTSSGMSMPAAAAAG-------- 127

  Fly   260 NDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAA 324
                                .||:...:||                        .|....|:.:.
 Worm   128 --------------------MYPFNAGRFP------------------------TEFNMMVNQSM 148

  Fly   325 RQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQV-SVR 388
            .......|.::...| ||.|   :.||..|||.....|.|:.|         |..|||... ::|
 Worm   149 YNDFYSNSLAASSWP-YSYP---QQYPFANYSMPSLDGNLNDG---------GQLEWTSSSHAMR 200

  Fly   389 KKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQR 448
            ||||||:|.||||||||||:|.|||||||||||:.|.||||||||||||||||:||..||
 Worm   201 KKRKPYTKAQTLELEKEFLYNTYVSKQKRWELAKYLHLTERQVKIWFQNRRMKDKKQKQR 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	47/55 (85%)
php-3	NP_499573.1	Homeodomain	200..256	CDD:459649	47/55 (85%)