DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and Hoxb7

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_034590.2 Gene:Hoxb7 / 15415 MGIID:96188 Length:217 Species:Mus musculus


Alignment Length:228 Identity:67/228 - (29%)
Similarity:103/228 - (45%) Gaps:46/228 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   272 YYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAA------------AAYMNEAERHVS--- 321
            ||.......||...:.|..|.:      |:||:.|.|:            |.:....:...|   
Mouse     5 YYANALFSKYPAASSVFAPGAF------PEQTSCAFASNPQRPGYGAGPGAPFSASVQGLYSGGG 63

  Fly   322 AAARQSVEGTSTSSY--EPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVG---------PCTPN 375
            |.|.||..|...:.|  ||.:::    :...|.|. :.||...|....|.|         ....|
Mouse    64 AMAGQSAAGVYAAGYGLEPSSFN----MHCAPFEQ-NLSGVCPGDPAKAAGAKEQRDSDLAAESN 123

  Fly   376 PGLHEWTGQVSVRKK--RKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNR 438
            ..::.|.......:|  |:.|:::|||||||||.:|.|:::::|.|:|..|.|||||:|||||||
Mouse   124 FRIYPWMRSSGPDRKRGRQTYTRYQTLELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNR 188

  Fly   439 RMKNKKNSQRQANQQNNNNNSSSNHNHAQATQQ 471
            |||.||       :...:...::..:.|:|.::
Mouse   189 RMKWKK-------ENKTSGPGTTGQDKAEAEEE 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 33/54 (61%)
Hoxb7NP_034590.2 Antp-type hexapeptide 126..131 1/4 (25%)
Homeobox 141..194 CDD:365835 32/52 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..217 4/30 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3844
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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