DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and Hoxa10

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_032289.2 Gene:Hoxa10 / 15395 MGIID:96171 Length:416 Species:Mus musculus


Alignment Length:407 Identity:110/407 - (27%)
Similarity:147/407 - (36%) Gaps:164/407 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 EDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALSPAQT--------------- 147
            :.|||           |.||.|||.||......|.....|.|.:.|.||.               
Mouse   132 DGPPP-----------PQPQPQQQQQQPPPPPPQPPQPQPQATSCSFAQNIKEESSYCLYDAADK 185

  Fly   148 -PTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVS 211
             |.|.:|..    .:|    .|:...|:..|.||||.:.          .||..::         
Mouse   186 CPKGSAAAD----LAP----FPRGPPPDGCALGASSGVP----------VPGYFRL--------- 223

  Fly   212 PSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAHWAYNDEGFNQHYGSGYYDRK 276
                 ||                                       ||   |..:.:|||....:
Mouse   224 -----SQ---------------------------------------AY---GTAKGFGSGGGGTQ 241

  Fly   277 HMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTY 341
            .: |.|:|..  |.|:.:.|   |....|.:            ..||.::.|    ..|..|||.
Mouse   242 QL-ASPFPAQ--PPGRGFDP---PPALASGS------------TEAAGKERV----LDSTPPPTL 284

  Fly   342 SSPGG------------------LRGYPSENYSSS------GASGGLSVGAVGPCTPNPGLHEWT 382
            ...||                  |...||||..:|      |:|.|.:..            .|.
Mouse   285 VCTGGGGSQGDEEAHASSSAAEELSPAPSENSKASPEKDSLGSSKGENAA------------NWL 337

  Fly   383 GQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQ 447
            ...|.||||.||:|.||||||||||||.|:::::|.|::|::.||:|||||||||||||.||   
Mouse   338 TAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK--- 399

  Fly   448 RQANQQNNNNNSSSNHN 464
              .|::|.....::|.|
Mouse   400 --MNRENRIRELTANFN 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 38/55 (69%)
Hoxa10NP_032289.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..60
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 81..167 14/45 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..345 33/150 (22%)
Homeodomain 343..399 CDD:459649 38/55 (69%)
Blue background indicates that the domain is not in the aligned region.

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