DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and Dlx3

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_034185.1 Gene:Dlx3 / 13393 MGIID:94903 Length:287 Species:Mus musculus


Alignment Length:197 Identity:56/197 - (28%)
Similarity:81/197 - (41%) Gaps:41/197 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   271 GYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSS 335
            |||..        |:..:..||.:|....|           |....:.:::..|       .|.:
Mouse    41 GYYSA--------PQHDYYSGQPYGQTVNP-----------YTYHHQFNLNGLA-------GTGA 79

  Fly   336 YEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCT----PNPGLHEWTGQ-VSVRKKRKPYS 395
            |.|.:..:.||       :|...||.....:.|..|.:    |...:....|: ..|||.|..||
Mouse    80 YSPKSEYTYGG-------SYRQYGAYREQPLPAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYS 137

  Fly   396 KFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNK---KNSQRQANQQNNNN 457
            .:|...|::.|....|::..:|.|||..|.||:.||||||||||.|.|   ||.:.......||:
Mouse   138 SYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNNS 202

  Fly   458 NS 459
            :|
Mouse   203 DS 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 28/58 (48%)
Dlx3NP_034185.1 DLL_N 27..107 CDD:463567 19/98 (19%)
COG5576 <109..224 CDD:227863 36/96 (38%)
Homeodomain 130..186 CDD:459649 27/55 (49%)
Interaction with DNA. /evidence=ECO:0000250|UniProtKB:O60479 131..181 23/49 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..287 3/10 (30%)

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