Protein Alignment Abd-B and Hoxd11

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001414331.1
• Gene: Hoxd11 / 102553842
• RGDID: 7730597
• Length: 336
• Species: Rattus norvegicus
• Alignment Length: 335
• Identity: 95/335 - (28%)
• Similarity: 125/335 - (37%)
• Gaps: 117/335 - (34%)

  Fly   197 PGQTQIVAPTTASVSPSSVSSQKEDINM----SIQLAPLHIPAIRAGPGFETDTSAAVKRH---T 254
            ||....|||:..:..||.: ||.....|    |..||| |:..:|         ..|.:.:   .
  Rat    17 PGCAYYVAPSDFASKPSFL-SQPSSCQMTFPYSSNLAP-HVQPVR---------EVAFRDYGLER 70

  Fly   255 AHWAYNDEGFNQHYGSG----------------YY--------------------------DRKH 277
            |.|.|...|.....|.|                ||                          .|:.
  Rat    71 AKWPYRGGGGGGAGGGGGGGPGGGGGGSGGYAPYYAAAAAAAAAAAAAEEAAMQRDLLPPAGRRP 135

  Fly   278 MFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAAR------------QSVEG 330
            ...:..||   ||....||.:.|     ||||:.:       .||..|            ::..|
  Rat   136 DVLFKAPE---PVCGAPGPPHGP-----AAAASNF-------YSAVGRNGILPQGFDQFYEAAPG 185

  Fly   331 TSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPC---TPNP---------------- 376
            ...:..:|....:|....|...:....:||.|    |...||   ||.|
  Rat   186 PPFAGPQPQPAPAPPQPEGAADKGDPKAGAGG----GGGSPCSKATPGPEPKGAAEGGGGEGEGP 246

  Fly   377 ----GLHEWTGQVS---VRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIW 434
                |..:..|.|:   .||||.||:|:|..|||:||.||.|::|:||.:|:|.|.||:||||||
  Rat   247 PGEAGAEKSGGTVAPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIW 311

  Fly   435 FQNRRMKNKK 444
            |||||||.||
  Rat   312 FQNRRMKEKK 321

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	37/55 (67%)
Hoxd11	NP_001414331.1	None