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Protein Alignment Abd-B and Hoxc11
DIOPT Version :9
| Sequence 1: | NP_001303472.1 |
Gene: | Abd-B / 47763 |
FlyBaseID: | FBgn0000015 |
Length: | 493 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_038934166.1 |
Gene: | Hoxc11 / 100911859 |
RGDID: | 6489991 |
Length: | 329 |
Species: | Rattus norvegicus |
| Alignment Length: | 194 |
Identity: | 40/194 - (20%) |
| Similarity: | 69/194 - (35%) |
Gaps: | 34/194 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 32 HHH--AHHHLPQPLHTTSHHHSAHPHLQQQQQQQQHAVVASSPSS--VLQQQQQQSTPTTHSTPT 92
||| |.|..|...:::.:.:|..|....:.....:.....:|:. ...:.:.:..|
Rat 124 HHHPSAPHAAPAGFYSSVNKNSVLPQAFDRFFDNAYCGGGDAPAEPPCSGKGEAKGEP------- 181
Fly 93 HAVMYEDPPPVPLVAVQQQHLPAPQQQQQLQQQQQQQQQQLATTPVAGALSPAQTPTGPSAQQQQ 157
|.||...|.:..:....|..:::................|..|| :|::.|..|
Rat 182 -----EAPPASGLASRAEAGAEAEAEEENTNPSSSGSSHSATKEPAKGA-APSRRPPNP------ 234
Fly 158 HLTSPHHQQLPQQQTPNSVASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKED 221
.:.||..:.|:. .:||...||:..||:.||.|....:...|| |.:.||.||.:
Rat 235 ------QEALPLFEIPDP-GTGARVFLQRVHQQREAAAAVPHAEPDRPT----SENLVSEQKNE 287
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Abd-B | NP_001303472.1 |
Homeobox |
390..443 |
CDD:278475 |
|
| Hoxc11 | XP_038934166.1 |
DUF3528 |
42..178 |
CDD:403310 |
9/53 (17%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG0487 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D414477at33208 |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
1 |
1.000 |
- |
- |
|
otm44776 |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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