DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and LOC100911668

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_006257771.1 Gene:LOC100911668 / 100911668 RGDID:6491746 Length:413 Species:Rattus norvegicus


Alignment Length:356 Identity:98/356 - (27%)
Similarity:139/356 - (39%) Gaps:95/356 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 PVAGALSPAQTPTGPSAQQQQHLTSPHHQQLPQQQTPNSVASGASSNLQQQQQ----------QQ 191
            |.:..:.|...|..|..|.||....|.....|.|..|.:.:...:.|::::..          .:
  Rat   123 PRSCRMEPPDGPPPPQPQPQQQQQPPPPPPQPPQPPPQATSCSFAQNIKEESSYCLYDSADKCPK 187

  Fly   192 NAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGPGFETDTSAAVKRHTAH 256
            .:|.|.     :||......|...:..          |...:|.    ||:          ....
  Rat   188 GSAAAD-----LAPFPRGPPPDGCALG----------ASSGVPV----PGY----------FRLS 223

  Fly   257 WAYNDEGFNQHYGSGYYDRKHMFAYPYPETQFPVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVS 321
            .||   |..:.:|||   .....|.|:|..  |.|:.:.|   |....|.:|            .
  Rat   224 QAY---GTAKGFGSG---GTQQLASPFPAQ--PPGRGFDP---PSALASGSA------------E 265

  Fly   322 AAARQSVEGTSTSSYEPPTYSSPGG------------------LRGYPSENYSSSGASGGLSVGA 368
            ||.::.|    ..|..|||....||                  |...||||..:|.....|.   
  Rat   266 AAGKERV----LDSTPPPTLVCAGGGSSQADEEAHASSSAAEELSPAPSENSKASPEKDSLG--- 323

  Fly   369 VGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKI 433
               .:.:.....|....|.||||.||:|.||||||||||||.|:::::|.|::|::.||:|||||
  Rat   324 ---NSKSENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKI 385

  Fly   434 WFQNRRMKNKKNSQRQANQQNNNNNSSSNHN 464
            ||||||||.||     .|::|.....::|.|
  Rat   386 WFQNRRMKLKK-----MNRENRIRELTANFN 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 36/52 (69%)
LOC100911668XP_006257771.1 Homeobox 342..395 CDD:278475 36/52 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7402
eggNOG 1 0.900 - - E1_KOG0487
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D414477at33208
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 1 1.000 - - otm44776
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45874
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.010

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