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Protein Alignment Abd-B and hoxd9
DIOPT Version :9
Sequence 1: | NP_001303472.1 |
Gene: | Abd-B / 47763 |
FlyBaseID: | FBgn0000015 |
Length: | 493 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_012826755.2 |
Gene: | hoxd9 / 100497640 |
XenbaseID: | XB-GENE-485791 |
Length: | 278 |
Species: | Xenopus tropicalis |
Alignment Length: | 79 |
Identity: | 48/79 - (60%) |
Similarity: | 60/79 - (75%) |
Gaps: | 0/79 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 374 PNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNR 438
||.....|....|.||||.||:|:||||||||||||.|:::.:|:|:||.|.|||||||||||||
Frog 198 PNNPAANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNR 262
Fly 439 RMKNKKNSQRQANQ 452
|||.||.::.:.|:
Frog 263 RMKMKKMNKEKGNK 276
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Abd-B | NP_001303472.1 |
Homeobox |
390..443 |
CDD:278475 |
39/52 (75%) |
hoxd9 | XP_012826755.2 |
Hox9_act |
1..181 |
CDD:398350 |
|
HOX |
211..260 |
CDD:197696 |
34/48 (71%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
92 |
1.000 |
Domainoid score |
I7474 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D414477at33208 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
otm47815 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 4.010 |
|
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