DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and ventx2.2

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_002937178.3 Gene:ventx2.2 / 100494704 XenbaseID:XB-GENE-920515 Length:333 Species:Xenopus tropicalis


Alignment Length:286 Identity:72/286 - (25%)
Similarity:116/286 - (40%) Gaps:70/286 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 VASGASSNLQQQQQQQNAAVAPGQTQIVAPTTASVSPSSVSSQKEDINMSIQLAPLHIPAIRAGP 240
            :|..:..:.::|..:.:...:|..:..:....:.|||||.:||...:..|.|::|.        |
 Frog    20 LAQSSRRSHKEQPSKGDQRYSPYPSPSLPSWNSDVSPSSWNSQLSPVAGSAQVSPC--------P 76

  Fly   241 G---FETDTSAAVKRHTAHWAYNDEGFNQ----------HYGSGYYDRKHMFAYPYPETQFPVGQ 292
            |   :.:|:.:::..:.....:.::..|.          |..:..:|...|.:.|          
 Frog    77 GSAQYSSDSESSLYSNEDEDLFCEKDLNTPSTPGDNGLLHKDTATHDYSGMVSVP---------- 131

  Fly   293 YWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSE-NYS 356
                 ....:|||...||               :|...|||.|             ||.|| :.|
 Frog   132 -----ANTPRTTSNEDAA---------------KSGYSTSTDS-------------GYESEASRS 163

  Fly   357 SSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELA 421
            ||.|..|   .|....:||....| .|::. |:.|..::..|...|||.|..:.|:...:|.:||
 Frog   164 SSTAPEG---DATVSLSPNDTSDE-EGKLG-RRLRTAFTSDQISTLEKTFQKHRYLGASERRKLA 223

  Fly   422 RNLQLTERQVKIWFQNRRMKNKKNSQ 447
            ..|||:|.|:|.||||||||.|:..|
 Frog   224 AKLQLSEVQIKTWFQNRRMKYKREIQ 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 25/55 (45%)
ventx2.2XP_002937178.3 Homeodomain 190..246 CDD:459649 25/55 (45%)

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