Protein Alignment Abd-B and hoxc13

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: XP_002936691.1
• Gene: hoxc13 / 100487255
• XenbaseID: XB-GENE-478832
• Length: 306
• Species: Xenopus tropicalis
• Alignment Length: 275
• Identity: 82/275 - (29%)
• Similarity: 122/275 - (44%)
• Gaps: 46/275 - (16%)

  Fly   204 APTTASVSPSSVSSQKEDINMSIQLAPLHIPAI--RAGPGFETDTS-AAVKRHTAHWAYNDE--G 263
            :|....:|.:..||...|. :|......|..||  ..||.:...|| .|.::.||..:.::.  |
 Frog    31 SPAMEGLSGNCASSHCRDF-ISHPALGRHSSAIGSHQGPVYTDITSPEAARQCTAPPSSSNASLG 94

  Fly   264 FNQHYGSGYY----DRKH-MFAYPYPETQFPVGQYWGP-NYRPDQTTSAAAA--AAYMNEAERHV 320
            :...:||.||    .:.| :..:..|.:..|..:|..| |..|.:..|:.|.  |.|.:
 Frog    95 YAYPFGSSYYGCRLSQSHNVNLHQKPCSYHPAEKYPEPSNPLPSEEFSSRAKEFAFYPS------ 153

  Fly   321 SAAARQSVEG-------TSTSSYEPPTYSS------------PGGLRG--YPSENYSSSGASGGL 364
            .|::.|:|.|       ...||:..|.:.:            |.|..|  |.|::.|.||.....
 Frog   154 FASSYQAVPGYLDMSVVPGISSHPEPRHDTLLSMEGYQHWALPNGWDGQVYCSKDQSQSGHLWKA 218

  Fly   365 SVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTER 429
            ....|.|..|     |.:.....||||.||:|.|..|||||:..:.:::|:||..::....|:||
 Frog   219 PFPDVVPLQP-----EVSNYRRGRKKRVPYTKIQLKELEKEYAASKFITKEKRRRISTATSLSER 278

  Fly   430 QVKIWFQNRRMKNKK 444
            ||.|||||||:|.||
 Frog   279 QVTIWFQNRRVKEKK 293

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	29/55 (53%)
hoxc13	XP_002936691.1	HoxA13_N	31..144	CDD:463521	29/113 (26%)
		Homeodomain	237..293	CDD:459649	29/55 (53%)