Protein Alignment Abd-B and Hoxb2

DIOPT Version :10

• Sequence 1: NP_524896.2
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 169
• Identity: 64/169 - (37%)
• Similarity: 84/169 - (49%)
• Gaps: 34/169 - (20%)

  Fly   284 PETQFPVGQYWGPNYRPDQTTSAAAAA---AYMNEAERHVSAAARQSVEGTSTSSYEPPTYSSPG 345
            |.:|.|.|.  ||..||......|..|   .:|.|.:     :|::..:..:|
  Rat    67 PGSQKPAGD--GPALRPPPPLPVAPPAPEFPWMKEKK-----SAKKPSQSAAT------------ 112

  Fly   346 GLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEFLFNA 410
                 ||...||..|||      ||..:..|||.|..|..| |:.|..|:..|.|||||||.||.
  Rat   113 -----PSPAASSVRASG------VGSPSDGPGLPESGGSGS-RRLRTAYTNTQLLELEKEFHFNK 165

  Fly   411 YVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQ 449
            |:.:.:|.|:|..|.|||||||:||||||||:|:.:|.:
  Rat   166 YLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQHR 204

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abd-B	NP_524896.2	Homeodomain	388..444	CDD:459649	33/55 (60%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	33/55 (60%)