DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abd-B and hoxb5

DIOPT Version :9

Sequence 1:NP_001303472.1 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:258 Identity:70/258 - (27%)
Similarity:114/258 - (44%) Gaps:76/258 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 HIPAIRAGPGFETDTS-----AAVKRHTAHWAYNDEGF----------NQHYGSGYYDRKHMFAY 281
            |:  :..|.|..::.|     ||.....:.:.||..|.          :.|||..        |:
 Frog    20 HV--LNYGTGSSSNLSGSYREAAGSMQPSAYGYNYNGMDLSVSRAAASSSHYGDS--------AF 74

  Fly   282 PYPETQF--------------PVGQYWGPNYRPDQTTSAAAAAAYMNEAERHVSAAARQSVEGTS 332
            |..|::|              |..:.......|....::|.::|...|.|.  ::|:.::.|.::
 Frog    75 PGQESRFRANQSCPLATPDPLPCAKSHKDELSPTDPATSAGSSAQFTEVEE--TSASSETEESST 137

  Fly   333 TSSYEPP----TYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSV------ 387
            ..|..||    ..||||           ::|..|           .||.:..|..::.:      
 Frog   138 PRSSAPPRALQENSSPG-----------AAGTDG-----------QNPQIFPWMRKLHINHDMTG 180

  Fly   388 ---RKKRKPYSKFQTLELEKEFLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQ 447
               ::.|..|:::|||||||||.||.|:::::|.|:|..|.|:|||:||||||||||.||:::
 Frog   181 PDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_001303472.1 Homeobox 390..443 CDD:278475 32/52 (62%)
hoxb5NP_001094494.1 Homeobox 187..240 CDD:365835 32/52 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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