DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abd-B and emx1l

DIOPT Version :10

Sequence 1:NP_524896.2 Gene:Abd-B / 47763 FlyBaseID:FBgn0000015 Length:493 Species:Drosophila melanogaster
Sequence 2:XP_002936883.1 Gene:emx1l / 100101663 XenbaseID:XB-GENE-876649 Length:213 Species:Xenopus tropicalis


Alignment Length:188 Identity:51/188 - (27%)
Similarity:71/188 - (37%) Gaps:59/188 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 QSVEGTSTSSYEP--PT---YSSPG----------GLR--GYPSENYSSSGASGGLSVGAVGPCT 373
            :::.|...:..||  ||   |..||          |:|  |.|...:....|.         |..
 Frog    13 EALVGPDRTPEEPLRPTALKYPEPGHGLTPTPLRPGVRLLGAPDLFFPEPAAP---------PYG 68

  Fly   374 PNPGL-------------------HEWTGQVSVRK--------KRKP------YSKFQTLELEKE 405
            |:.||                   |...|:.:...        .|||      :|..|.|.||..
 Frog    69 PSLGLPQHRILHRDPLSFCPWILRHRLPGEENTPDNYLLHGPFSRKPKRIRTAFSPSQLLRLEGA 133

  Fly   406 FLFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNNNNSSSNH 463
            |..|.||...:|.:||.:|.|||.|||:||||||.|:|:....:...::.....|:.|
 Frog   134 FEKNHYVVGAERKQLANSLCLTETQVKVWFQNRRTKHKRQKLEEECPESQQKRKSTQH 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abd-BNP_524896.2 Homeodomain 388..444 CDD:459649 29/69 (42%)
emx1lXP_002936883.1 Homeodomain 116..172 CDD:459649 26/55 (47%)

Return to query results.
Submit another query.