DRSC/TRiP Functional Genomics Resources

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Protein Alignment RabGGTb and BET2

DIOPT Version :10

Sequence 1:NP_524894.1 Gene:RabGGTb / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_015502.1 Gene:BET2 / 856306 SGDID:S000006380 Length:325 Species:Saccharomyces cerevisiae


Alignment Length:310 Identity:161/310 - (51%)
Similarity:214/310 - (69%) Gaps:8/310 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRCQCPNTGGF 97
            ||:.|||:...::.::||.:||.||::|||||.|||.::...|...::.:|.||..|.....|.|
Yeast    11 KHIRYIESLDTKKHNFEYWLTEHLRLNGIYWGLTALCVLDSPETFVKEEVISFVLSCWDDKYGAF 75

  Fly    98 APCEGHDPHLLYTLSAIQILCTYDALEEIDREAVVR---FVVGLQQPDGSFFGDKWGEVDTRFSF 159
            ||...||.|||.||||:|||.|||||:.:.::..||   |:.|.|..||||.||::|||||||.:
Yeast    76 APFPRHDAHLLTTLSAVQILATYDALDVLGKDRKVRLISFIRGNQLEDGSFQGDRFGEVDTRFVY 140

  Fly   160 CAVASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLL 224
            .|:::|::||.:...: |:.||.|||.|.| .|||||..|.|||||...:.|:|..::.::|.:|
Yeast   141 TALSALSILGELTSEV-VDPAVDFVLKCYN-FDGGFGLCPNAESHAAQAFTCLGALAIANKLDML 203

  Fly   225 DVDKL---GWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQD 286
            ..|:|   ||||||||||.|||||||.||||||||||||:||.|:|||.||:.|||.:|||.|||
Yeast   204 SDDQLEEIGWWLCERQLPEGGLNGRPSKLPDVCYSWWVLSSLAIIGRLDWINYEKLTEFILKCQD 268

  Fly   287 TETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTLCMPQYIIDR 336
            .:.||.|||..|..|:|||:||:.||||:|:..|..|:|..|||:.:..:
Yeast   269 EKKGGISDRPENEVDVFHTVFGVAGLSLMGYDNLVPIDPIYCMPKSVTSK 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RabGGTbNP_524894.1 GGTase-II 29..315 CDD:239224 153/287 (53%)
BET2NP_015502.1 GGTase-II 7..297 CDD:239224 153/287 (53%)

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