DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-II and RAM1

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_010193.1 Gene:RAM1 / 851468 SGDID:S000002248 Length:431 Species:Saccharomyces cerevisiae


Alignment Length:309 Identity:92/309 - (29%)
Similarity:144/309 - (46%) Gaps:45/309 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 IYWGTTALDIMGQ--LERLERKSIIEFVKRCQCPNTGGFAPCEGHDPHLLYTLSAIQILCTYDAL 123
            :||...:|.:|.:  |....::.|::.:.... |:.|.|....|...||..|.:||..|...|.:
Yeast   110 LYWIANSLKVMDRDWLSDDTKRKIVDKLFTIS-PSGGPFGGGPGQLSHLASTYAAINALSLCDNI 173

  Fly   124 ----EEIDREAVVRFVVGLQQPDGSFFGDKW----GEVDTRFSFCAVASLTLLGRMEQTIDVEKA 180
                :.|||:.:.::::.|::|:|.|   |.    ||||||..:||::..|||..:  |.::.:.
Yeast   174 DGCWDRIDRKGIYQWLISLKEPNGGF---KTCLEVGEVDTRGIYCALSIATLLNIL--TEELTEG 233

  Fly   181 VKFVLSCCNQTDGGFGSKPGA-ESHAGLIYCCVGFFSLTHRLHLLDVDKLGWWLCERQL-PSGGL 243
            |...|..|...:|||||.|.. |:|.|..:|.....::...:..::|:||..|...||| ...|.
Yeast   234 VLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEWSSARQLQEERGF 298

  Fly   244 NGRPEKLPDVCYSWWVLASLTIM---GRLHWISSEKLQQFIL-SCQDTETGGFSDRTGNMPDIFH 304
            .||..||.|.|||:||..|..|:   |.....:...|:.:|| .||:.|..|..|:.|...|.:|
Yeast   299 CGRSNKLVDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYILYCCQEKEQPGLRDKPGAHSDFYH 363

  Fly   305 TLFGIGGLS-----------------------LLGHSGLKAINPTLCMP 330
            |.:.:.||:                       |:|.|.|..:||...:|
Yeast   364 TNYCLLGLAVAESSYSCTPNDSPHNIKCTPDRLIGSSKLTDVNPVYGLP 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 85/292 (29%)
PLN03201 33..340 CDD:215630 92/309 (30%)
RAM1NP_010193.1 FTase 80..374 CDD:239223 85/269 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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