DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaggt-II and ERA1

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001331518.1 Gene:ERA1 / 834026 AraportID:AT5G40280 Length:514 Species:Arabidopsis thaliana


Alignment Length:363 Identity:90/363 - (24%)
Similarity:140/363 - (38%) Gaps:108/363 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YWGTTALDIMGQL--ERLERKSIIEFVKRCQCPNTGGFAPCEGHDPHLLYTLSAIQILCTY---D 121
            ||...::.::|:.  :.|| .:.|:|:.||| .:.||:....|..|||..|.:|:..|.|.   .
plant   113 YWILHSIALLGETVDDELE-SNAIDFLGRCQ-GSEGGYGGGPGQLPHLATTYAAVNALVTLGGDK 175

  Fly   122 ALEEIDREAV------VRFVVGL--------------------------QQPDGSFFGDKWGEVD 154
            ||..|:|..:      |.|:..|                          :...|.|.....||:|
plant   176 ALSSINRWCILFSLWSVSFIKSLVMFPLEYLHVTHSSFREKMSCFLRRMKDTSGGFRMHDMGEMD 240

  Fly   155 TRFSFCAVASLTLLGRMEQTIDVEKAVKFVLSCCNQT-DGGFGSKPGAESHAGLIYCCVGFFSLT 218
            .|..:.|::..::|..|:..: .:....::|||  || :||.|.:||:|:|.|..||.:....|.
plant   241 VRACYTAISVASILNIMDDEL-TQGLGDYILSC--QTYEGGIGGEPGSEAHGGYTYCGLAAMILI 302

  Fly   219 HRLHLLDVDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRL-------------- 269
            :.:..|::|.|..|...||....|..||..||.|.||::|..|...::.||              
plant   303 NEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTNDHDVHGSSHI 367

  Fly   270 ------------------------------------HWI---------------SSEKLQQFILS 283
                                                |.|               .|..||:::|.
plant   368 SEGTNEEHHAHDEDDLEDSDDDDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGLQRYVLL 432

  Fly   284 CQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLK 321
            |.....|||.|:.....|.:||.:.:.|||:..|:.||
plant   433 CSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLK 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 87/355 (25%)
PLN03201 33..340 CDD:215630 90/363 (25%)
ERA1NP_001331518.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.