DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-II and RGTB1

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_568259.1 Gene:RGTB1 / 831094 AraportID:AT5G12210 Length:321 Species:Arabidopsis thaliana


Alignment Length:305 Identity:161/305 - (52%)
Similarity:216/305 - (70%) Gaps:3/305 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRCQCPNTGGF 97
            |||.||....|:::.:|..:.:.|||:|.|||.|.||::.:|..:..:.:|.::..|| ..:|||
plant    16 KHVRYILMAEKKKESFESVVMDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQ-HESGGF 79

  Fly    98 APCEGHDPHLLYTLSAIQILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDTRFSFCAV 162
            |...|||||:||||||:|||..:|.:..:|...|..:|..||..||||.||.|||:|||||:.|:
plant    80 AGNTGHDPHILYTLSAVQILALFDKINILDIGKVSSYVAKLQNEDGSFSGDMWGEIDTRFSYIAI 144

  Fly   163 ASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLLDVD 227
            ..|::|..::: |:||||||:::||.| .|||||..||||||||.|:||||..::|..||.:|.|
plant   145 CCLSILKCLDK-INVEKAVKYIVSCKN-LDGGFGCTPGAESHAGQIFCCVGALAITGSLHHVDKD 207

  Fly   228 KLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETGGF 292
            .||||||||||.:||||||||||.|||||||||:||.::.|:|||...||.:|||.|||.:.||.
plant   208 SLGWWLCERQLKAGGLNGRPEKLADVCYSWWVLSSLIMIDRVHWIDKAKLVKFILDCQDLDNGGI 272

  Fly   293 SDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTLCMPQYIIDRL 337
            |||..:..|||||.||:.|||||.:.|:|.|:|...:|..:::|:
plant   273 SDRPEDAVDIFHTYFGVAGLSLLEYPGVKVIDPAYALPVDVVNRI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 153/281 (54%)
PLN03201 33..340 CDD:215630 161/305 (53%)
RGTB1NP_568259.1 PLN03201 5..320 CDD:215630 161/305 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3371
Inparanoid 1 1.050 339 1.000 Inparanoid score I648
OMA 1 1.010 - - QHG53725
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 1 1.000 - - FOG0004681
OrthoInspector 1 1.000 - - otm2879
orthoMCL 1 0.900 - - OOG6_102449
Panther 1 1.100 - - LDO PTHR11774
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3289
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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