DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-II and pggt1b

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001025426.1 Gene:pggt1b / 570808 ZFINID:ZDB-GENE-050913-85 Length:355 Species:Danio rerio


Alignment Length:315 Identity:96/315 - (30%)
Similarity:147/315 - (46%) Gaps:47/315 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 YCMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFV--------------KRC----------- 89
            |...|..|::..::..:.||::|.|:.::|.|:||::              :||           
Zfish    29 YAPYETSRLTIAFFSLSGLDVLGALDVVDRHSLIEWIYSLQILPTADQSNLQRCGFRGSSHIGVP 93

  Fly    90 QCPNTGGFAPCEGHDPHLLYTLSAIQ-ILCTYDALEEIDREAVVRFVVGLQQPDGSFFGDKWG-E 152
            ...:.|..||......|:..|.:.:. :|...|.|..:||.|.|..:..||..||||:....| |
Zfish    94 YSSSKGPGAPHPYDSGHVTMTYTGLACLLILGDDLGRVDRAACVSGLRALQLEDGSFYAVPEGSE 158

  Fly   153 VDTRFSFCAVASLTLLG-----RMEQTID-VEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCC 211
            .|.||.:||.....:|.     ..::||| :.::..|        |.|.|...|.|||.|..:|.
Zfish   159 NDMRFVYCAACICFMLDDWSGMDRQKTIDYIRRSTSF--------DFGIGQGAGLESHGGSTFCA 215

  Fly   212 VGFFSLTHRLHLL----DVDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWI 272
            |....:..:|..:    ::.:|..|...||  ..|..|||.|..|.|||:||.|:|.::....:.
Zfish   216 VASLCMMGKLREVFSERELGRLRRWCVLRQ--QNGFQGRPNKPVDTCYSFWVGATLQLLDVFQYT 278

  Fly   273 SSEKLQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTL 327
            :.||.:.:|||.||...|||:....:.||..||.|||.||||:|.:||:.::..|
Zfish   279 NFEKNRNYILSTQDRLVGGFAKWPDSHPDPLHTYFGICGLSLMGEAGLQPVHAAL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 91/301 (30%)
PLN03201 33..340 CDD:215630 96/315 (30%)
pggt1bNP_001025426.1 CAL1 10..331 CDD:227362 95/311 (31%)
GGTase-I 11..321 CDD:239225 91/301 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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