DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-II and fntb

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001017258.1 Gene:fntb / 550012 XenbaseID:XB-GENE-494043 Length:414 Species:Xenopus tropicalis


Alignment Length:310 Identity:108/310 - (34%)
Similarity:154/310 - (49%) Gaps:34/310 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 HVEYIENHGKQ-EDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLERKS----IIEFVKRCQCPN 93
            |..|:....:. .|.|| |: :..|....||   .:..||.|:....:|    :.:|:..||.||
 Frog    63 HTHYLRKGLRYLSDSYE-CL-DSSRPWLCYW---IVHSMGLLDEPIPESLASDVCQFLTLCQDPN 122

  Fly    94 TGGFAPCEGHDPHLLYTLSAIQILCTY---DALEEIDREAVVRFVVGLQQPDGSFFGDKWGEVDT 155
             |||....|..|||..|.:|:..|||.   :|.:.|:||.::.|:..|:||||||.....||||.
 Frog   123 -GGFCGGPGQQPHLAPTFAAVNALCTIGTEEAFDVINREKLLAFLWSLKQPDGSFTMHIGGEVDV 186

  Fly   156 RFSFCA--VASLTLLGRMEQTIDVEKAVKFVLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLT 218
            |.::||  |||||.:    .|.::.......::.|...:||.|..||.|:|.|..:|.|....:.
 Frog   187 RSAYCAASVASLTNI----MTTELFDGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGVAALVIL 247

  Fly   219 HRLHLLDVDKLGWWLCERQLP-SGGLNGRPEKLPDVCYSWWVLASLTIMGR-LH----------- 270
            .|:||||:..|..|:..||:. .||..||..||.|.|||:|....|.::.| ||           
 Frog   248 QRVHLLDLRSLLRWVTCRQMRFEGGFQGRCNKLVDGCYSFWQGGLLPLLHRTLHAEGDSAINLAN 312

  Fly   271 WI-SSEKLQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSG 319
            |: ..:.||::||.|.....||..|:.|...|.:||.:.:.|||:..|.|
 Frog   313 WMFDQQALQEYILLCCQCPNGGLLDKPGKSRDFYHTCYCLSGLSIAQHFG 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 106/304 (35%)
PLN03201 33..340 CDD:215630 108/310 (35%)
fntbNP_001017258.1 FTase 60..358 CDD:239223 106/304 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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