DRSC/TRiP Functional Genomics Resources

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Protein Alignment betaggt-II and pggt1b

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_001008137.1 Gene:pggt1b / 493499 XenbaseID:XB-GENE-975346 Length:372 Species:Xenopus tropicalis


Alignment Length:333 Identity:98/333 - (29%)
Similarity:157/333 - (47%) Gaps:50/333 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KHVEYIENHGKQEDDYEYCMT-EFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRCQ------ 90
            :||.|.:...:...  |.|.: |..|::..::..:.||::..|..:.:..|||::...|      
 Frog    19 RHVRYFQRSLQLLP--EQCASLETNRLTIAFFALSGLDMLDSLNVINKSEIIEWIYSLQVLPTED 81

  Fly    91 ------CPNTGG------FAPCEGH-------DPHLLYTLSAI-QILCTYDALEEIDREAVVRFV 135
                  |...|.      |.|.:||       ..|:..|.:|| .:|...|.|..:::||.:..:
 Frog    82 KSNLDRCGFRGSSCLGLPFNPSKGHGLYHPHDSGHIAMTYTAIASLLILGDDLSRVNKEACLAGL 146

  Fly   136 VGLQQPDGSFFGDKWG-EVDTRFSFCAVASLTLLG-----RMEQTID-VEKAVKFVLSCCNQTDG 193
            ..||.|||||.....| |.|.||.:||.....:|.     .||::|| :.:::.:        :.
 Frog   147 RALQLPDGSFCAVPEGSENDMRFVYCAACICYMLNDWSGMDMERSIDYIRRSMSY--------EN 203

  Fly   194 GFGSKPGAESHAGLIYCCVGFFSLTHRLHLL----DVDKLGWWLCERQLPSGGLNGRPEKLPDVC 254
            ..|...|.|:|.|..:|.:....|..:|..:    :::::|.|...||  ..|.:|||.|..|.|
 Frog   204 ALGQGAGLEAHGGSTFCGIASLCLMGKLEEVFSEKELNRIGRWCLMRQ--QNGFHGRPNKPVDTC 266

  Fly   255 YSWWVLASLTIMGRLHWISSEKLQQFILSCQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSG 319
            ||:||.|:|.::....:.:.||.:.||||.||...|||:....:.||..|..|||.||||:|.:|
 Frog   267 YSFWVGATLMLLDIFKYTNFEKNRNFILSTQDRIVGGFAKWPDSHPDALHAYFGICGLSLIGEAG 331

  Fly   320 LKAINPTL 327
            :..::|.|
 Frog   332 ICEVHPAL 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 93/319 (29%)
PLN03201 33..340 CDD:215630 98/333 (29%)
pggt1bNP_001008137.1 GGTase-I 18..327 CDD:239225 93/319 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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