DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment betaggt-II and betaggt-I

DIOPT Version :9

Sequence 1:NP_524894.1 Gene:betaggt-II / 47757 FlyBaseID:FBgn0028970 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_525100.2 Gene:betaggt-I / 33704 FlyBaseID:FBgn0015000 Length:395 Species:Drosophila melanogaster


Alignment Length:305 Identity:98/305 - (32%)
Similarity:147/305 - (48%) Gaps:37/305 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RMSGIYWGTTALDIMGQLERLE---RKSIIEF------VKRCQCPNTGGFAPCEGHDP------- 105
            |.:.:::....||::..|..:.   |:.||::      |.|....|.|||..|....|       
  Fly    37 RSTIVFFAVCGLDVLNSLHLVPPQLRQDIIDWIYGGLVVPRDNEKNCGGFMGCRAMVPKTEDAEI 101

  Fly   106 ----------HLLYTLSAIQILCTY-DALEEIDREAVVRFVVGLQQPDGSFFGDKWG-EVDTRFS 158
                      ||..|.:::.:|.|. |.|..:||:::|..|..:|:|:|||.....| |.|.||.
  Fly   102 LECMRNYQWGHLAMTYTSLAVLVTLGDDLSRLDRKSIVDGVAAVQKPEGSFSACIDGSEDDMRFV 166

  Fly   159 FCAVASLTLLGRMEQTIDVEKAVKF-VLSCCNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLH 222
            :||.   |:...::...||.|...| .::...:.|.||..:...|:|.|..:|.:....|:.:||
  Fly   167 YCAA---TICYMLDYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLH 228

  Fly   223 LLD---VDKLGWWLCERQLPSGGLNGRPEKLPDVCYSWWVLASLTIMGRLHWISSEKLQQFILSC 284
            .||   |:::..||..||:  .|..|||.|..|.|||:|:.|||.|:.........:.::||||.
  Fly   229 RLDATTVERMKRWLIFRQM--DGFQGRPNKPVDTCYSFWIGASLCILDGFELTDYARNREFILST 291

  Fly   285 QDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTLCM 329
            ||...|||:......||.|||..|:.||:..|..||..:||:|.|
  Fly   292 QDKLIGGFAKWPQATPDPFHTYLGLCGLAFTGEPGLSPVNPSLNM 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
betaggt-IINP_524894.1 GGTase-II 29..315 CDD:239224 91/289 (31%)
PLN03201 33..340 CDD:215630 98/305 (32%)
betaggt-INP_525100.2 CAL1 10..336 CDD:227362 97/303 (32%)
GGTase-I 14..321 CDD:239225 91/288 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438460
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5029
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1042804at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11774
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.